BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021G07SP1|AL427811
(946 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig682 1279 0.0
3x_Contig860 493 e-139
>3x_Contig682
Length = 2655
Score = 1279 bits (636), Expect = 0.0
Identities = 673/697 (96%), Gaps = 1/697 (0%)
Strand = Plus / Minus
Query: 251 ctgaatctgttgactcgttcattcaagatgtaaggmagactttaaattataamatatgtc 310
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 2655 ctgaatctgttgactcgttcattcaagatgtaaggaagactttaaattataaaatatgtc 2596
Query: 311 aatctttcatgtagcataattaacatagatttcaatataacgtaacatcctagggtggaa 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2595 aatctttcatgtagcataattaacatagatttcaatataacgtaacatcctagggtggaa 2536
Query: 371 ttccttggatgamaatacagcgataattaatctcaaccttgtaaactttaaactgtataa 430
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2535 ttccttggatgaaaatacagcgataattaatctcaaccttgtaaactttaaactgtataa 2476
Query: 431 ttytyttctttagatttttgactgtgtttaatattatmmacagactgcactagattagat 490
|| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2475 ttttattctttagatttttgactgtgtttaatattataaacagactgcactagattagat 2416
Query: 491 aagtgctttttatgttctactctaaatagagattctatgamagattgcmgagattgtatt 550
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 2415 aagtgctttttatgttctactctaaatagagattctatgaaagattgcagagattgtatt 2356
Query: 551 cccataagavactaacgggcatgacattcgaagttgntctaataacatammacmmggatg 610
||||||||| |||||||||||||||||||||||||| |||||||| ||| | |||||
Sbjct: 2355 cccataagaaactaacgggcatgacattcgaagttgatctaataaaataaaaaaaggatg 2296
Query: 611 agtaaatgaaaaatgaaggaacggtacgaaagagtcaaacgaatctgamaacgaacaaac 670
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2295 agtaaatgaaaaatgaaggaacggtacgaaagagtcaaacgaatctgaaaacgaacaaac 2236
Query: 671 gatatattggmtt-ccattatcgatcttaccacagagtcaatgagtgcattcatattaaw 729
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2235 gatatattggattcccattatcgatcttaccacagagtcaatgagtgcattcatattaaa 2176
Query: 730 atctttatttcagtgcactatattatgatttcctcatgtttttcttggagatccttaawa 789
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2175 atctttatttcagtgcactatattatgatttcctcatgtttttcttggagatccttaaaa 2116
Query: 790 ttaacaaacgacatcttgagtagctctagagttcaacaatagggcaacaatcaaaccgta 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2115 ttaacaaacgacatcttgagtagctctagagttcaacaatagggcaacaatcaaaccgta 2056
Query: 850 caaacccaaaacttcagcgaaawtcaagatcaaaatcataccaacgaataatcttggktg 909
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 2055 caaacccaaaacttcagcgaaaatcaagatcaaaatcataccaacgaataatcttggttg 1996
Query: 910 ttgagcagtacctctaacacctgcatcaccaacaata 946
|||||||||||||||||||||||||||||||||||||
Sbjct: 1995 ttgagcagtacctctaacacctgcatcaccaacaata 1959
>3x_Contig860
Length = 4193
Score = 493 bits (245), Expect = e-139
Identities = 248/249 (99%)
Strand = Plus / Plus
Query: 1 aatgaaacggagaaatcgatgaaccatatgattcaattgattagtttcccatacatgcca 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3945 aatgaaacggagaaagcgatgaaccatatgattcaattgattagtttcccatacatgcca 4004
Query: 61 gagcaatattgtattttattgctggccaaattcttctacccaatgtttttaaagacaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4005 gagcaatattgtattttattgctggccaaattcttctacccaatgtttttaaagacaaca 4064
Query: 121 gagacagctttagatgaatcacagatttttacaatactgaagactttggaaaaaatcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4065 gagacagctttagatgaatcacagatttttacaatactgaagactttggaaaaaatcaag 4124
Query: 181 ctaaacgattcttgtgttgcactatattcacaattaaggaatgacgacaactcgacatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4125 ctaaacgattcttgtgttgcactatattcacaattaaggaatgacgacaactcgacatgc 4184
Query: 241 agcaactta 249
|||||||||
Sbjct: 4185 agcaactta 4193
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6301
Number of Sequences: 1807
Number of extensions: 6301
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 2
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)